Index

A

Affine (class in fmristats.affines) Affines (class in fmristats.affines) AffineTransformation (class in fmristats.diffeomorphisms) apply() (fmristats.affines.Affine method) (fmristats.affines.Affines method) (fmristats.diffeomorphisms.AffineTransformation method) (fmristats.diffeomorphisms.Diffeomorphism method) (fmristats.diffeomorphisms.Displacement method) (fmristats.diffeomorphisms.Identity method) (fmristats.diffeomorphisms.Warp method) apply_to_index() (fmristats.affines.Affine method) (fmristats.affines.Affines method) (fmristats.diffeomorphisms.AffineTransformation method) (fmristats.diffeomorphisms.Diffeomorphism method) (fmristats.diffeomorphisms.Displacement method) (fmristats.diffeomorphisms.Identity method) (fmristats.diffeomorphisms.Warp method)

apply_to_indices() (fmristats.affines.Affine method) (fmristats.diffeomorphisms.AffineTransformation method) (fmristats.diffeomorphisms.Diffeomorphism method) (fmristats.diffeomorphisms.Displacement method) (fmristats.diffeomorphisms.Identity method) (fmristats.diffeomorphisms.Warp method) aspect() (fmristats.affines.Affine method) at_index() (fmristats.sample.Sample method)

C

components() (fmristats.diffeomorphisms.Image method) coordinates() (fmristats.diffeomorphisms.Diffeomorphism method) (fmristats.smodel.SignalModel method)

coordinates_domain() (fmristats.diffeomorphisms.Diffeomorphism method) create_slice_timing() (in module fmristats.session)

D

data_at_coordinate() (fmristats.smodel.SignalModel method) data_at_index() (fmristats.smodel.SignalModel method) data_at_subject_coordinate() (fmristats.smodel.SignalModel method) describe() (fmristats.diffeomorphisms.Image method) (fmristats.reference.ReferenceMaps method) descriptive_statistics() (fmristats.reference.ReferenceMaps method) (fmristats.session.Session method) descriptive_statistics_detailed() (fmristats.session.Session method)

design_AT_coordinate() (fmristats.smodel.SignalModel method) design_AT_index() (fmristats.smodel.SignalModel method) design_AT_subject_coordinate() (fmristats.smodel.SignalModel method) detect_outlying_scans() (fmristats.reference.ReferenceMaps method) detect_peaks() (fmristats.diffeomorphisms.Image method) Diffeomorphism (class in fmristats.diffeomorphisms) Displacement (class in fmristats.diffeomorphisms) dot() (fmristats.affines.Affine method) (fmristats.affines.Affines method)

E

euler() (fmristats.affines.Affine method) (fmristats.affines.Affines method)

F

filter() (fmristats.sample.Sample method) fit() (fmristats.pmodel.PopulationModel method) (fmristats.reference.ReferenceMaps method) (fmristats.smodel.SignalModel method) fit_AT_coordinate() (fmristats.smodel.SignalModel method) fit_at_coordinate() (fmristats.smodel.SignalModel method) fit_AT_index() (fmristats.smodel.SignalModel method) fit_at_index() (fmristats.smodel.SignalModel method) fit_AT_subject_coordinate() (fmristats.smodel.SignalModel method) fit_at_subject_coordinate() (fmristats.smodel.SignalModel method)

fit_at_subject_coordinates() (fmristats.smodel.SignalModel method) flatten() (fmristats.diffeomorphisms.Image method) fmrisetup() (in module fmristats.session) fmristats.affines (module) fmristats.diffeomorphisms (module) fmristats.pmap (module) fmristats.pmodel (module) fmristats.reference (module) fmristats.sample (module) fmristats.session (module) fmristats.smodel (module)

G

get_field() (fmristats.smodel.Result method) (fmristats.smodel.SignalFit method) get_mask() (fmristats.diffeomorphisms.Image method) (fmristats.smodel.SignalModel method)

get_observations() (fmristats.smodel.SignalModel method) get_roi() (fmristats.smodel.SignalModel method)

I

Identity (class in fmristats.diffeomorphisms) Image (class in fmristats.diffeomorphisms) inv() (fmristats.affines.Affine method) (fmristats.affines.Affines method)

is_rotation_matrix() (in module fmristats.affines) isclose() (in module fmristats.affines) isinverse() (in module fmristats.affines)

M

mask() (fmristats.diffeomorphisms.Image method) (fmristats.smodel.Result method) (fmristats.smodel.SignalFit method) mean() (fmristats.affines.Affines method) (fmristats.diffeomorphisms.Image method) mean_index_affine() (fmristats.smodel.SignalModel method) mean_rigid() (fmristats.affines.Affines method)

mean_within_windows() (fmristats.affines.Affines method) model_AT_coordinate() (fmristats.smodel.SignalModel method) model_at_coordinate() (fmristats.smodel.SignalModel method) model_AT_index() (fmristats.smodel.SignalModel method) model_at_index() (fmristats.smodel.SignalModel method) model_AT_subject_coordinate() (fmristats.smodel.SignalModel method) model_at_subject_coordinate() (fmristats.smodel.SignalModel method)

N

norm_to() (fmristats.smodel.Result method) (fmristats.smodel.SignalFit method)

norm_to_ati() (fmristats.smodel.Result method) (fmristats.smodel.SignalFit method)

P

pmap_scanner() (in module fmristats.pmap)

PopulationMap (class in fmristats.pmap) PopulationModel (class in fmristats.pmodel)

R

range() (fmristats.diffeomorphisms.Image method) ravel() (fmristats.diffeomorphisms.Image method) ReferenceMaps (class in fmristats.reference)

reset_reference_space() (fmristats.reference.ReferenceMaps method) resolution() (fmristats.affines.Affine method) Result (class in fmristats.smodel) round() (fmristats.diffeomorphisms.Image method)

S

Sample (class in fmristats.sample) save() (fmristats.affines.Affine method) (fmristats.affines.Affines method) (fmristats.diffeomorphisms.Diffeomorphism method) (fmristats.diffeomorphisms.Image method) (fmristats.pmap.PopulationMap method) (fmristats.pmodel.PopulationModel method) (fmristats.reference.ReferenceMaps method) (fmristats.sample.Sample method) (fmristats.session.Session method) (fmristats.smodel.Result method) (fmristats.smodel.SignalFit method) (fmristats.smodel.SignalModel method) Session (class in fmristats.session) set_acquisition_maps() (fmristats.reference.ReferenceMaps method) set_data() (fmristats.smodel.SignalModel method)

set_design() (fmristats.smodel.SignalModel method) set_design_to() (fmristats.smodel.SignalModel method) set_hyperparameters() (fmristats.smodel.SignalModel method) set_nb() (fmristats.pmap.PopulationMap method) set_nb_background() (fmristats.pmap.PopulationMap method) set_nb_estimate() (fmristats.pmap.PopulationMap method) set_nb_mask() (fmristats.pmap.PopulationMap method) set_slice_timing() (fmristats.session.Session method) set_stimulus() (fmristats.session.Session method) set_stimulus_design() (fmristats.smodel.SignalModel method) set_vb() (fmristats.pmap.PopulationMap method) set_vb_ati() (fmristats.pmap.PopulationMap method) set_vb_background() (fmristats.pmap.PopulationMap method) set_vb_estimate() (fmristats.pmap.PopulationMap method) set_vb_mask() (fmristats.pmap.PopulationMap method) SignalFit (class in fmristats.smodel) SignalModel (class in fmristats.smodel)

V

volume() (fmristats.affines.Affine method) (fmristats.diffeomorphisms.Image method)

W

Warp (class in fmristats.diffeomorphisms)